STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167R8D8MFS Git1p-like glycerophosphoinositol permease. (500 aa)    
Predicted Functional Partners:
A0A167I143
GP-PDE domain-containing protein.
   
 
 0.692
A0A167R6P3
SPX-domain-containing protein.
   
 
 0.462
A0A167H1Y2
Sodium/sulfate symporter.
    
 
 0.444
A0A167LHS1
Zn(2)-C6 fungal-type domain-containing protein.
    
 
 0.425
Your Current Organism:
Calocera viscosa
NCBI taxonomy Id: 1330018
Other names: C. viscosa TUFC12733, Calocera viscosa TUFC12733
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.