Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKI96726.1 | AKI96728.1 | IX53_01580 | IX53_01595 | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.691 |
| AKI96726.1 | AKI96729.1 | IX53_01580 | IX53_01600 | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.618 |
| AKI96726.1 | AKI96730.1 | IX53_01580 | IX53_01605 | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.545 |
| AKI96726.1 | AKI98194.1 | IX53_01580 | IX53_01585 | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.721 |
| AKI96726.1 | glnQ | IX53_01580 | IX53_01590 | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.670 |
| AKI96728.1 | AKI96726.1 | IX53_01595 | IX53_01580 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.691 |
| AKI96728.1 | AKI96729.1 | IX53_01595 | IX53_01600 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.995 |
| AKI96728.1 | AKI96730.1 | IX53_01595 | IX53_01605 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.637 |
| AKI96728.1 | AKI97703.1 | IX53_01595 | IX53_07610 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |
| AKI96728.1 | AKI97704.1 | IX53_01595 | IX53_07615 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.517 |
| AKI96728.1 | AKI98194.1 | IX53_01595 | IX53_01585 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| AKI96728.1 | glnQ | IX53_01595 | IX53_01590 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AKI96728.1 | mnmA | IX53_01595 | IX53_01610 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.445 |
| AKI96729.1 | AKI96726.1 | IX53_01600 | IX53_01580 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.618 |
| AKI96729.1 | AKI96728.1 | IX53_01600 | IX53_01595 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| AKI96729.1 | AKI96730.1 | IX53_01600 | IX53_01605 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.705 |
| AKI96729.1 | AKI97134.1 | IX53_01600 | IX53_04130 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
| AKI96729.1 | AKI97447.1 | IX53_01600 | IX53_06020 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
| AKI96729.1 | AKI97703.1 | IX53_01600 | IX53_07610 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
| AKI96729.1 | AKI97704.1 | IX53_01600 | IX53_07615 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
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