STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR10551.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (225 aa)    
Predicted Functional Partners:
EPR10194.1
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.979
msrA
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.551
EPR09198.1
Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.514
EPR10550.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.503
EPR10388.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.491
EPR13554.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.470
EPR09343.1
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.452
EPR12154.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.
     
 0.439
Your Current Organism:
Ruminiclostridium papyrosolvens C7
NCBI taxonomy Id: 1330534
Other names: Clostridium papyrosolvens C7, R. papyrosolvens C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.