STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AALB_0457ADP-heptose-lipooligosaccharide heptosyltransferase II. (357 aa)    
Predicted Functional Partners:
AALB_0456
Possible heptosyltransferase.
 
     0.920
AALB_0454
ADP-heptose-lipooligosaccharide heptosyltransferase II.
  
   
 0.755
AALB_0448
ADP-heptose-lipooligosaccharide heptosyltransferase II.
 
 
0.745
AALB_0455
Lipopolysaccharide biosynthesis glycosyltransferase.
 
  
 0.742
AALB_2094
Iron-sulfur binding.
  
   0.713
hldE
ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.631
AALB_1472
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
 
  
 0.603
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
     
 0.589
AALB_2550
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
   0.570
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
 
  
 0.554
Your Current Organism:
Agarivorans albus
NCBI taxonomy Id: 1331007
Other names: A. albus MKT 106, Agarivorans albus MKT 106, marine gamma proteobacterium MKT106
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