STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AALB_0722Endo-1,4-beta-xylanase A precursor. (374 aa)    
Predicted Functional Partners:
AALB_1304
Endo-1,4-beta-xylanase A precursor.
  
 0.875
AALB_0365
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.848
AALB_1570
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.802
AALB_1237
Endo-1,4-beta-xylanase A precursor.
 
   
 0.798
AALB_1238
Endo-1,4-beta-xylanase A precursor.
 
   
 0.791
AALB_0319
Endoglucanase C; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.788
AALB_3787
Chitinase.
 
   
 0.775
AALB_0961
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.771
AALB_1437
Beta-1,3(4)-glucanase precursor.
  
 0.754
AALB_2061
Endo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.752
Your Current Organism:
Agarivorans albus
NCBI taxonomy Id: 1331007
Other names: A. albus MKT 106, Agarivorans albus MKT 106, marine gamma proteobacterium MKT106
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