STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L486_01380Transcription factor. (558 aa)    
Predicted Functional Partners:
L486_04975
Pre-mRNA-processing factor 17.
  
  0.927
L486_01406
Pre-mRNA-splicing factor CWC22.
   
 0.906
L486_01537
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
 
  
 0.896
L486_07401
Peptidylprolyl isomerase domain and WD-repeat protein 1.
   
  0.864
L486_04003
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.862
L486_07678
Pre-mRNA-splicing factor CWC25.
    
  0.858
L486_05422
Nuclear mRNA splicing protein.
    
  0.858
L486_02084
Pre-mRNA-splicing factor SYF2.
    
  0.858
L486_00082
Cyclophilin.
    
  0.835
L486_02467
Bud site selection protein 31.
   
 
 0.820
Your Current Organism:
Kwoniella mangroviensis
NCBI taxonomy Id: 1331196
Other names: K. mangroviensis CBS 10435, Kwoniella mangroviensis CBS 10435, Kwoniella mangroviensis CBS10435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.