STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN77937.1Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)    
Predicted Functional Partners:
AGN77936.1
Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.994
AGN77933.1
Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.990
AGN77935.1
Organic solvent ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.984
AGN77934.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.964
AGN77246.1
Cell division protein FtsE; ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.868
AGN79594.1
Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.868
AGN77245.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.864
AGN82918.1
Organic solvent ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.864
AGN77247.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.856
AGN79593.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.856
Your Current Organism:
Pseudomonas putida H8234
NCBI taxonomy Id: 1331671
Other names: P. putida H8234
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