STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN81884.1Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (292 aa)    
Predicted Functional Partners:
AGN81883.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.967
AGN81882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.933
AGN81881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.932
AGN81885.1
AlpA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.924
AGN83055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.874
AGN81880.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.871
AGN81878.1
Single-stranded DNA-binding protein; Binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.868
AGN83058.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.778
AGN83056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.775
AGN81842.1
Integrating conjugative element relaxase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.774
Your Current Organism:
Pseudomonas putida H8234
NCBI taxonomy Id: 1331671
Other names: P. putida H8234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.