STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKC24148.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)    
Predicted Functional Partners:
KKC25114.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
KKC24065.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
KKC24672.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
KKC25532.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
KKC24512.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.583
KKC24149.1
4-phytase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
KKC24150.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
KKC27214.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
KKC24431.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
KKC26893.1
Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.511
Your Current Organism:
Sphingomonas sp. SRS2
NCBI taxonomy Id: 133190
Other names: S. sp. SRS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.