STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L336_0179SPFH domain / Band 7 family protein. (253 aa)    
Predicted Functional Partners:
ftsH
Cell-division protein and general stress protein (class III heat-shock); Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.999
L336_0086
Hypothetical protein; No homology to any previously reported sequences.
  
 0.636
L336_0764
Putative Zn-dependent peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.636
L336_0765
Hypothetical protein; No homology to any previously reported sequences.
  
 0.636
L336_0189
Putative Cation transporting P-type ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
   
 0.537
dnaK
Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.535
L336_0520
Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.513
L336_0181
Hypothetical protein; No homology to any previously reported sequences.
     
 0.508
L336_0887
Putative Microtubule-severing ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the AAA ATPase family.
   
 
 0.487
polA
DNA polymerase I; Function of strongly homologous gene; enzyme.
  
  
 0.469
Your Current Organism:
Saccharimonas aalborgensis
NCBI taxonomy Id: 1332188
Other names: C. Saccharimonas aalborgensis, Candidatus Saccharimonas aalborgensis
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