node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L336_0215 | L336_0217 | L336_0215 | L336_0217 | Putative Extracellular solute-binding protein family 5; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. | Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.800 |
L336_0215 | secG | L336_0215 | L336_0216 | Putative Extracellular solute-binding protein family 5; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.800 |
L336_0217 | L336_0215 | L336_0217 | L336_0215 | Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative Extracellular solute-binding protein family 5; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. | 0.800 |
L336_0217 | secG | L336_0217 | L336_0216 | Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.800 |
L336_0520 | rplM | L336_0520 | L336_0993 | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.468 |
L336_0520 | rplS | L336_0520 | L336_0060 | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.488 |
L336_0520 | rplU | L336_0520 | L336_0731 | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.463 |
L336_0520 | secA | L336_0520 | L336_0763 | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Translocase binding subunit (ATPase); Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.934 |
L336_0520 | secE | L336_0520 | L336_0969 | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Preprotein translocase subunit; Function of strongly homologous gene; factor; Belongs to the SecE/SEC61-gamma family. | 0.966 |
L336_0520 | secG | L336_0520 | L336_0216 | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.988 |
L336_0520 | secY | L336_0520 | L336_1000 | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Preprotein translocase subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.988 |
rplM | L336_0520 | L336_0993 | L336_0520 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.468 |
rplM | rplS | L336_0993 | L336_0060 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
rplM | rplU | L336_0993 | L336_0731 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
rplM | rplY | L336_0993 | L336_0248 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.999 |
rplM | secA | L336_0993 | L336_0763 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Translocase binding subunit (ATPase); Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.588 |
rplM | secE | L336_0993 | L336_0969 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Preprotein translocase subunit; Function of strongly homologous gene; factor; Belongs to the SecE/SEC61-gamma family. | 0.934 |
rplM | secG | L336_0993 | L336_0216 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.896 |
rplM | secY | L336_0993 | L336_1000 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Preprotein translocase subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.999 |
rplS | L336_0520 | L336_0060 | L336_0520 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Putative 60 kDa inner membrane insertion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.488 |