Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| L336_0254 | L336_0256 | L336_0254 | L336_0256 | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.431 |
| L336_0254 | L336_0257 | L336_0254 | L336_0257 | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Homologs of previously reported genes of unknown function. | 0.544 |
| L336_0254 | L336_0258 | L336_0254 | L336_0258 | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Actin-like ATPase involved in cell division-like protein. | 0.562 |
| L336_0254 | L336_0856 | L336_0254 | L336_0856 | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; No homology to any previously reported sequences. | 0.432 |
| L336_0254 | mltG | L336_0254 | L336_0255 | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.427 |
| L336_0254 | obg | L336_0254 | L336_0253 | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.586 |
| L336_0256 | L336_0254 | L336_0256 | L336_0254 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.431 |
| L336_0256 | L336_0257 | L336_0256 | L336_0257 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Homologs of previously reported genes of unknown function. | 0.800 |
| L336_0256 | L336_0258 | L336_0256 | L336_0258 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Actin-like ATPase involved in cell division-like protein. | 0.800 |
| L336_0256 | mltG | L336_0256 | L336_0255 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Putative Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.810 |
| L336_0256 | obg | L336_0256 | L336_0253 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.403 |
| L336_0257 | L336_0254 | L336_0257 | L336_0254 | Homologs of previously reported genes of unknown function. | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.544 |
| L336_0257 | L336_0256 | L336_0257 | L336_0256 | Homologs of previously reported genes of unknown function. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.800 |
| L336_0257 | L336_0258 | L336_0257 | L336_0258 | Homologs of previously reported genes of unknown function. | Actin-like ATPase involved in cell division-like protein. | 0.890 |
| L336_0257 | mltG | L336_0257 | L336_0255 | Homologs of previously reported genes of unknown function. | Putative Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.800 |
| L336_0257 | obg | L336_0257 | L336_0253 | Homologs of previously reported genes of unknown function. | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.449 |
| L336_0258 | L336_0254 | L336_0258 | L336_0254 | Actin-like ATPase involved in cell division-like protein. | Putative CHAP domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.562 |
| L336_0258 | L336_0256 | L336_0258 | L336_0256 | Actin-like ATPase involved in cell division-like protein. | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.800 |
| L336_0258 | L336_0257 | L336_0258 | L336_0257 | Actin-like ATPase involved in cell division-like protein. | Homologs of previously reported genes of unknown function. | 0.890 |
| L336_0258 | mltG | L336_0258 | L336_0255 | Actin-like ATPase involved in cell division-like protein. | Putative Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.831 |
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