STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L336_0257Homologs of previously reported genes of unknown function. (540 aa)    
Predicted Functional Partners:
L336_0258
Actin-like ATPase involved in cell division-like protein.
 
     0.890
mltG
Putative Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.800
L336_0256
Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.800
L336_0669
Hypothetical protein; No homology to any previously reported sequences.
  
     0.744
L336_0535
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.691
L336_0777
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.634
L336_0619
Hypothetical protein; No homology to any previously reported sequences.
  
     0.621
L336_0817
Hypothetical protein; No homology to any previously reported sequences.
 
     0.605
L336_0686
Homologs of previously reported genes of unknown function.
 
     0.602
L336_0074
Homologs of previously reported genes of unknown function.
  
     0.593
Your Current Organism:
Saccharimonas aalborgensis
NCBI taxonomy Id: 1332188
Other names: C. Saccharimonas aalborgensis, Candidatus Saccharimonas aalborgensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.