Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
L336_0322 | L336_0323 | Hypothetical protein; No homology to any previously reported sequences. | Homologs of previously reported genes of unknown function. | 0.994 |
L336_0322 | L336_0324 | Hypothetical protein; No homology to any previously reported sequences. | Type II secretion system protein E. | 0.558 |
L336_0322 | L336_0325 | Hypothetical protein; No homology to any previously reported sequences. | Type II secretion system protein. | 0.558 |
L336_0322 | L336_0326 | Hypothetical protein; No homology to any previously reported sequences. | Cell division protein FtsA. | 0.450 |
L336_0322 | L336_0327 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.452 |
L336_0322 | L336_0328 | Hypothetical protein; No homology to any previously reported sequences. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.445 |
L336_0322 | L336_0329 | Hypothetical protein; No homology to any previously reported sequences. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.443 |
L336_0322 | L336_0330 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.446 |
L336_0323 | L336_0322 | Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.994 |
L336_0323 | L336_0324 | Homologs of previously reported genes of unknown function. | Type II secretion system protein E. | 0.573 |
L336_0323 | L336_0325 | Homologs of previously reported genes of unknown function. | Type II secretion system protein. | 0.580 |
L336_0323 | L336_0326 | Homologs of previously reported genes of unknown function. | Cell division protein FtsA. | 0.459 |
L336_0323 | L336_0327 | Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.447 |
L336_0323 | L336_0328 | Homologs of previously reported genes of unknown function. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.445 |
L336_0323 | L336_0329 | Homologs of previously reported genes of unknown function. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.443 |
L336_0323 | L336_0330 | Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.446 |
L336_0324 | L336_0322 | Type II secretion system protein E. | Hypothetical protein; No homology to any previously reported sequences. | 0.558 |
L336_0324 | L336_0323 | Type II secretion system protein E. | Homologs of previously reported genes of unknown function. | 0.573 |
L336_0324 | L336_0325 | Type II secretion system protein E. | Type II secretion system protein. | 0.981 |
L336_0324 | L336_0326 | Type II secretion system protein E. | Cell division protein FtsA. | 0.771 |
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