STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L336_0456Homologs of previously reported genes of unknown function. (256 aa)    
Predicted Functional Partners:
L336_0457
Hypothetical protein; No homology to any previously reported sequences.
       0.470
L336_0458
Hypothetical protein; No homology to any previously reported sequences.
       0.470
apt
Putative Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.470
L336_0460
Putative Arylformamidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.470
L336_0461
Hypothetical protein; No homology to any previously reported sequences.
       0.470
trpF
Putative N-(5'-phosphoribosyl)anthranilate isomerase 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the TrpF family.
       0.470
L336_0463
Hypothetical protein; No homology to any previously reported sequences.
       0.470
L336_0464
Putative ADP-ribose pyrophosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.470
rbpA
Putative RNA-binding protein rbpA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.458
L336_0454
Hypothetical protein; No homology to any previously reported sequences.
       0.437
Your Current Organism:
Saccharimonas aalborgensis
NCBI taxonomy Id: 1332188
Other names: C. Saccharimonas aalborgensis, Candidatus Saccharimonas aalborgensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.