STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L336_0652Exported protein of unknown function; No homology to any previously reported sequences. (828 aa)    
Predicted Functional Partners:
L336_0651
Exported protein of unknown function; No homology to any previously reported sequences.
       0.773
pilM
Type IV pilus assembly protein; Function of strongly homologous gene; structure.
       0.596
L336_0654
Putative Fimbrial assembly family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.596
L336_0655
Homologs of previously reported genes of unknown function.
       0.596
L336_0656
Exported protein of unknown function; No homology to any previously reported sequences.
       0.596
L336_0657
Putative type II secretion system protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.580
pilT
Twitching motility protein; Function of homologous gene experimentally demonstrated in an other organism; phenotype.
       0.562
L336_0659
Putative Type IV pilus assembly protein PilC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.561
L336_0650
Hypothetical protein; No homology to any previously reported sequences.
       0.414
L336_0660
Hypothetical protein; No homology to any previously reported sequences.
       0.413
Your Current Organism:
Saccharimonas aalborgensis
NCBI taxonomy Id: 1332188
Other names: C. Saccharimonas aalborgensis, Candidatus Saccharimonas aalborgensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.