STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L336_0806Conserved protein of unknown function; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (342 aa)    
Predicted Functional Partners:
L336_0805
Putative beta-glucosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the glycosyl hydrolase 1 family.
       0.776
L336_0804
Hypothetical protein; No homology to any previously reported sequences.
       0.738
leuS
leucyl-tRNA synthetase; Function of strongly homologous gene; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
   0.499
L336_0065
Hypothetical protein; No homology to any previously reported sequences.
  
  
 0.460
metK
S-adenosylmethionine synthetase; Function of strongly homologous gene; enzyme.
       0.431
L336_0803
Putative helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.425
Your Current Organism:
Saccharimonas aalborgensis
NCBI taxonomy Id: 1332188
Other names: C. Saccharimonas aalborgensis, Candidatus Saccharimonas aalborgensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.