U5CPF0_AMBTC protein (Amborella trichopoda) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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[Homology]

Score

U5CPF0_AMBTC

Uncharacterized protein. (243 aa)

Predicted Functional Partners:

U5D093_AMBTC

0.982

W1PAU8_AMBTC

0.900

U5D389_AMBTC

0.598

W1PPC7_AMBTC

0.588

U5D5P7_AMBTC

0.570

W1P7Z1_AMBTC

0.545

W1PKF4_AMBTC

0.540

W1NDK3_AMBTC

0.467

W1NMV4_AMBTC

0.463

W1PJX6_AMBTC

0.463

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
U5CPF0_AMBTC	U5D093_AMBTC	U5CPF0	U5D093	Uncharacterized protein.	tRNA_int_end_N2 domain-containing protein.	0.982
U5CPF0_AMBTC	U5D389_AMBTC	U5CPF0	U5D389	Uncharacterized protein.	Uncharacterized protein.	0.598
U5CPF0_AMBTC	U5D5P7_AMBTC	U5CPF0	U5D5P7	Uncharacterized protein.	Uncharacterized protein.	0.570
U5CPF0_AMBTC	W1NDK3_AMBTC	U5CPF0	W1NDK3	Uncharacterized protein.	tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.	0.467
U5CPF0_AMBTC	W1NMV4_AMBTC	U5CPF0	W1NMV4	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.463
U5CPF0_AMBTC	W1P7Z1_AMBTC	U5CPF0	W1P7Z1	Uncharacterized protein.	Uncharacterized protein.	0.545
U5CPF0_AMBTC	W1PAU8_AMBTC	U5CPF0	W1PAU8	Uncharacterized protein.	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.	0.900
U5CPF0_AMBTC	W1PJX6_AMBTC	U5CPF0	W1PJX6	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.463
U5CPF0_AMBTC	W1PKF4_AMBTC	U5CPF0	W1PKF4	Uncharacterized protein.	Uncharacterized protein.	0.540
U5CPF0_AMBTC	W1PPC7_AMBTC	U5CPF0	W1PPC7	Uncharacterized protein.	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.588
U5D093_AMBTC	U5CPF0_AMBTC	U5D093	U5CPF0	tRNA_int_end_N2 domain-containing protein.	Uncharacterized protein.	0.982
U5D093_AMBTC	U5D389_AMBTC	U5D093	U5D389	tRNA_int_end_N2 domain-containing protein.	Uncharacterized protein.	0.555
U5D093_AMBTC	U5D5P7_AMBTC	U5D093	U5D5P7	tRNA_int_end_N2 domain-containing protein.	Uncharacterized protein.	0.568
U5D093_AMBTC	W1P7Z1_AMBTC	U5D093	W1P7Z1	tRNA_int_end_N2 domain-containing protein.	Uncharacterized protein.	0.540
U5D093_AMBTC	W1PAU8_AMBTC	U5D093	W1PAU8	tRNA_int_end_N2 domain-containing protein.	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.	0.833
U5D093_AMBTC	W1PKF4_AMBTC	U5D093	W1PKF4	tRNA_int_end_N2 domain-containing protein.	Uncharacterized protein.	0.540
U5D093_AMBTC	W1PPC7_AMBTC	U5D093	W1PPC7	tRNA_int_end_N2 domain-containing protein.	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.558
U5D389_AMBTC	U5CPF0_AMBTC	U5D389	U5CPF0	Uncharacterized protein.	Uncharacterized protein.	0.598
U5D389_AMBTC	U5D093_AMBTC	U5D389	U5D093	Uncharacterized protein.	tRNA_int_end_N2 domain-containing protein.	0.555
U5D389_AMBTC	W1P7Z1_AMBTC	U5D389	W1P7Z1	Uncharacterized protein.	Uncharacterized protein.	0.998