STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5CYK8_AMBTCUncharacterized protein. (1010 aa)    
Predicted Functional Partners:
U5D809_AMBTC
Aamy domain-containing protein.
   
 0.969
W1PYS1_AMBTC
Aamy domain-containing protein.
   
 0.968
W1NL06_AMBTC
Aamy domain-containing protein.
   
 0.962
W1NGP7_AMBTC
4-alpha-glucanotransferase.
     
 0.950
W1NYN3_AMBTC
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
 
0.935
U5DCE7_AMBTC
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
 
 0.922
U5CU20_AMBTC
Nudix hydrolase domain-containing protein.
   
 
 0.908
W1P6D0_AMBTC
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
 
 0.886
W1NHI8_AMBTC
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
 
 0.885
W1PWW7_AMBTC
NTP_transferase domain-containing protein.
 
 0.871
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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