U5CYY6_AMBTC protein (Amborella trichopoda) - STRING interaction network

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second shell of interactors

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

U5CYY6_AMBTC

Uncharacterized protein. (184 aa)

Predicted Functional Partners:

W1PAB1_AMBTC

0.764

W1NHJ5_AMBTC

0.613

W1NWS2_AMBTC

0.613

W1NUR4_AMBTC

0.598

W1NDT6_AMBTC

0.537

W1PKX8_AMBTC

0.534

U5D4U0_AMBTC

0.516

W1NSM0_AMBTC

0.516

U5DCV4_AMBTC

0.511

U5CNR4_AMBTC

0.509

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
U5CNR4_AMBTC	U5CYY6_AMBTC	U5CNR4	U5CYY6	Uncharacterized protein.	Uncharacterized protein.	0.509
U5CNR4_AMBTC	U5D4U0_AMBTC	U5CNR4	U5D4U0	Uncharacterized protein.	G domain-containing protein.	0.968
U5CNR4_AMBTC	W1NSM0_AMBTC	U5CNR4	W1NSM0	Uncharacterized protein.	CP-type G domain-containing protein.	0.968
U5CNR4_AMBTC	W1NUR4_AMBTC	U5CNR4	W1NUR4	Uncharacterized protein.	Nop domain-containing protein.	0.906
U5CNR4_AMBTC	W1PAB1_AMBTC	U5CNR4	W1PAB1	Uncharacterized protein.	Nop domain-containing protein.	0.758
U5CNR4_AMBTC	W1PKX8_AMBTC	U5CNR4	W1PKX8	Uncharacterized protein.	Brix domain-containing protein.	0.999
U5CYY6_AMBTC	U5CNR4_AMBTC	U5CYY6	U5CNR4	Uncharacterized protein.	Uncharacterized protein.	0.509
U5CYY6_AMBTC	U5D4U0_AMBTC	U5CYY6	U5D4U0	Uncharacterized protein.	G domain-containing protein.	0.516
U5CYY6_AMBTC	U5DCV4_AMBTC	U5CYY6	U5DCV4	Uncharacterized protein.	RRM domain-containing protein.	0.511
U5CYY6_AMBTC	W1NDT6_AMBTC	U5CYY6	W1NDT6	Uncharacterized protein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.537
U5CYY6_AMBTC	W1NHJ5_AMBTC	U5CYY6	W1NHJ5	Uncharacterized protein.	Uncharacterized protein.	0.613
U5CYY6_AMBTC	W1NSM0_AMBTC	U5CYY6	W1NSM0	Uncharacterized protein.	CP-type G domain-containing protein.	0.516
U5CYY6_AMBTC	W1NUR4_AMBTC	U5CYY6	W1NUR4	Uncharacterized protein.	Nop domain-containing protein.	0.598
U5CYY6_AMBTC	W1NWS2_AMBTC	U5CYY6	W1NWS2	Uncharacterized protein.	Uncharacterized protein.	0.613
U5CYY6_AMBTC	W1PAB1_AMBTC	U5CYY6	W1PAB1	Uncharacterized protein.	Nop domain-containing protein.	0.764
U5CYY6_AMBTC	W1PKX8_AMBTC	U5CYY6	W1PKX8	Uncharacterized protein.	Brix domain-containing protein.	0.534
U5D4U0_AMBTC	U5CNR4_AMBTC	U5D4U0	U5CNR4	G domain-containing protein.	Uncharacterized protein.	0.968
U5D4U0_AMBTC	U5CYY6_AMBTC	U5D4U0	U5CYY6	G domain-containing protein.	Uncharacterized protein.	0.516
U5D4U0_AMBTC	W1NDT6_AMBTC	U5D4U0	W1NDT6	G domain-containing protein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.763
U5D4U0_AMBTC	W1NHJ5_AMBTC	U5D4U0	W1NHJ5	G domain-containing protein.	Uncharacterized protein.	0.720