STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5D2Z8_AMBTCUncharacterized protein. (559 aa)    
Predicted Functional Partners:
W1NNE1_AMBTC
AAA_16 domain-containing protein.
    
 
 0.818
W1NI23_AMBTC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.793
W1PPJ2_AMBTC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.793
W1PPK0_AMBTC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.751
W1P6U2_AMBTC
3'-5' exonuclease domain-containing protein.
  
 
 0.723
W1PBA6_AMBTC
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.723
W1PDD2_AMBTC
Uncharacterized protein.
   
 
 0.716
U5CZ54_AMBTC
Uncharacterized protein.
    
 
 0.712
U5D1I2_AMBTC
Dna2 domain-containing protein.
    
 
 0.712
W1PQK0_AMBTC
Zinc-hook domain-containing protein.
   
 
 0.680
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.