STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5D7X9_AMBTCAldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (503 aa)    
Predicted Functional Partners:
W1PK16_AMBTC
Rieske domain-containing protein.
  
 
 0.969
U5DDA7_AMBTC
GMC_OxRdtase_N domain-containing protein.
  
 
 0.936
W1PMR6_AMBTC
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
0.920
W1PJ72_AMBTC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.827
W1PD27_AMBTC
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.741
U5DG81_AMBTC
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
    
 0.678
U5D0U3_AMBTC
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.676
W1PQ54_AMBTC
Transket_pyr domain-containing protein.
   
 
 0.658
W1P571_AMBTC
Aminotran_5 domain-containing protein.
  
 0.654
U5D087_AMBTC
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.640
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.