STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5D855_AMBTCUncharacterized protein. (82 aa)    
Predicted Functional Partners:
W1PK69_AMBTC
Uncharacterized protein.
   
 
 0.646
W1PU05_AMBTC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.639
W1PI60_AMBTC
HORMA domain-containing protein.
   
 0.615
W1NGS3_AMBTC
Uncharacterized protein.
   
 
 0.592
W1PF67_AMBTC
Uncharacterized protein.
   
 
 0.592
U5D474_AMBTC
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 
 0.475
W1PG14_AMBTC
Uncharacterized protein.
    
 
 0.449
W1PGX6_AMBTC
Uncharacterized protein.
    
 
 0.449
W1PIP3_AMBTC
Uncharacterized protein.
    
 
 0.449
W1PKE5_AMBTC
Uncharacterized protein.
    
 
 0.449
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (26%) [HD]