STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5D9L1_AMBTCUncharacterized protein. (276 aa)    
Predicted Functional Partners:
W1PPK0_AMBTC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.624
W1NWT8_AMBTC
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.619
U5D9M9_AMBTC
ABC transporter domain-containing protein.
   
  
 0.590
U5D0G1_AMBTC
Uncharacterized protein.
      
 0.533
W1PJX2_AMBTC
Uncharacterized protein.
  
     0.502
W1P734_AMBTC
Uncharacterized protein.
  
     0.493
W1NRB7_AMBTC
Uncharacterized protein.
      
 0.465
W1NPG6_AMBTC
Uncharacterized protein.
  
     0.445
U5CQT7_AMBTC
Uncharacterized protein.
  
 0.435
U5D5K5_AMBTC
BHLH domain-containing protein.
      
 0.412
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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