STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5DAQ8_AMBTCAAA domain-containing protein. (331 aa)    
Predicted Functional Partners:
U5D7G9_AMBTC
AAA domain-containing protein.
  
0.997
W1NMK0_AMBTC
AAA domain-containing protein.
  
0.993
U5D702_AMBTC
Uncharacterized protein.
    
 0.989
W1NI23_AMBTC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.977
W1PPJ2_AMBTC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.977
W1P479_AMBTC
AAA domain-containing protein.
   
0.976
W1NE54_AMBTC
BRCT domain-containing protein.
   
0.974
W1NEW0_AMBTC
RFC1 domain-containing protein.
   
 0.974
W1NDX9_AMBTC
AAA domain-containing protein.
   
0.971
W1NFY5_AMBTC
Uncharacterized protein.
   
0.971
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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