STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5DB97_AMBTCUncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (580 aa)    
Predicted Functional Partners:
W1PB02_AMBTC
Phosphotransferase.
   
 
 0.945
U5D4A0_AMBTC
Phosphotransferase.
   
 
 0.942
W1NQ25_AMBTC
Phosphotransferase.
   
 
 0.939
U5D6M9_AMBTC
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.
  
 
 0.922
W1NX46_AMBTC
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.918
W1NTD0_AMBTC
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.
  
 
 0.917
W1NE50_AMBTC
Uncharacterized protein.
   
 
 0.904
W1P5C8_AMBTC
Uncharacterized protein.
     
 0.903
W1P8P7_AMBTC
Alpha-galactosidase.
     
 0.901
W1PEA0_AMBTC
Alpha-galactosidase.
     
 0.901
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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