STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5DBP4_AMBTCJ domain-containing protein. (237 aa)    
Predicted Functional Partners:
W1PU64_AMBTC
Uncharacterized protein.
   
 
 0.724
W1NDW7_AMBTC
Uncharacterized protein.
   
 0.668
W1PJ56_AMBTC
Uncharacterized protein.
  
 0.654
U5DD61_AMBTC
Uncharacterized protein.
  
  
 0.550
U5D6M8_AMBTC
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.537
U5DCI6_AMBTC
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.537
W1P7N4_AMBTC
Uncharacterized protein.
  
 0.537
W1PNA1_AMBTC
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.537
W1P366_AMBTC
Uncharacterized protein.
   
  
 0.531
U5CNV8_AMBTC
Tr-type G domain-containing protein.
  
 0.477
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.