STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5DFF5_AMBTCDiacylglycerol kinase. (662 aa)    
Predicted Functional Partners:
U5CVC4_AMBTC
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.932
W1PBP3_AMBTC
Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.
     
 0.926
U5D224_AMBTC
Uncharacterized protein.
     
 0.921
W1P0H2_AMBTC
Uncharacterized protein.
     
 0.920
W1PPX8_AMBTC
Uncharacterized protein.
     
 0.920
W1PRB4_AMBTC
Uncharacterized protein.
     
 0.920
W1PPT2_AMBTC
Glyco_trans_4-like_N domain-containing protein.
     
 0.919
W1PBB3_AMBTC
Phosphoinositide phospholipase C.
     
 0.912
W1PC16_AMBTC
Phosphoinositide phospholipase C.
     
 0.912
W1PWS1_AMBTC
LNS2 domain-containing protein.
     
 0.912
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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