STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5DH44_AMBTCUncharacterized protein. (354 aa)    
Predicted Functional Partners:
W1NGB0_AMBTC
TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.869
W1PE50_AMBTC
Uncharacterized protein.
  
 0.869
W1PP54_AMBTC
Uncharacterized protein.
  
 0.869
W1PVE1_AMBTC
Uncharacterized protein.
  
 0.789
W1PPK0_AMBTC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.512
W1PJ72_AMBTC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
  
 0.474
W1NU41_AMBTC
MSP domain-containing protein.
      
 0.461
U5CUN8_AMBTC
Uncharacterized protein; Belongs to the synaptobrevin family.
      
 0.450
W1PXR4_AMBTC
Uncharacterized protein; Belongs to the synaptobrevin family.
      
 0.448
W1NP59_AMBTC
Uncharacterized protein.
     
 0.443
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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