STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NDT4_AMBTCVOC domain-containing protein. (105 aa)    
Predicted Functional Partners:
ndhI
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I 23 kDa subunit family.
  
  
 0.728
U5CVW8_AMBTC
Uncharacterized protein.
  
  
 0.728
W1NJD0_AMBTC
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.718
W1PN45_AMBTC
Lactamase_B domain-containing protein.
    
 0.667
W1NTZ4_AMBTC
Uncharacterized protein.
   
  
 0.659
W1P7X5_AMBTC
Nitroreductase domain-containing protein.
  
  
 0.656
W1PC09_AMBTC
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.648
W1PFD0_AMBTC
L51_S25_CI-B8 domain-containing protein.
   
    0.642
U5CNY3_AMBTC
Uncharacterized protein.
    
 0.637
U5D0F6_AMBTC
VOC domain-containing protein.
    
 0.637
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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