STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NDV3_AMBTCUncharacterized protein. (75 aa)    
Predicted Functional Partners:
U5DF59_AMBTC
Uncharacterized protein.
    
 0.806
W1NL97_AMBTC
Uncharacterized protein.
    
 0.806
W1P2N5_AMBTC
Uncharacterized protein.
    
 0.806
W1P695_AMBTC
Uncharacterized protein.
    
 0.803
U5D9J4_AMBTC
MRG domain-containing protein.
    
 0.718
U5CZG8_AMBTC
Uncharacterized protein.
    
 0.707
W1NVQ9_AMBTC
HDAC_interact domain-containing protein.
    
 0.707
W1NVN2_AMBTC
Uncharacterized protein.
    
 0.706
W1PFC3_AMBTC
Uncharacterized protein.
    
 0.664
W1NFR6_AMBTC
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.651
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.