W1NJZ9_AMBTC protein (Amborella trichopoda) - STRING interaction network

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Score

W1NJZ9_AMBTC

Nudix hydrolase domain-containing protein. (180 aa)

Predicted Functional Partners:

W1NPV7_AMBTC

0.846

U5D029_AMBTC

0.827

W1P5G7_AMBTC

0.827

U5D0I5_AMBTC

0.740

W1PDG7_AMBTC

0.727

LSM1

0.665

LSM4

0.651

W1PQS6_AMBTC

0.600

LSM3

0.593

W1PP03_AMBTC

0.581

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM3	W1NW09	U5D0U8	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
LSM1	LSM4	W1NW09	W1P3L4	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.991
LSM1	U5D029_AMBTC	W1NW09	U5D029	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.802
LSM1	U5D0I5_AMBTC	W1NW09	U5D0I5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.837
LSM1	W1NJZ9_AMBTC	W1NW09	W1NJZ9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Nudix hydrolase domain-containing protein.	0.665
LSM1	W1NPV7_AMBTC	W1NW09	W1NPV7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.861
LSM1	W1P5G7_AMBTC	W1NW09	W1P5G7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.802
LSM1	W1PDG7_AMBTC	W1NW09	W1PDG7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.956
LSM1	W1PP03_AMBTC	W1NW09	W1PP03	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Sm domain-containing protein.	0.995
LSM1	W1PQS6_AMBTC	W1NW09	W1PQS6	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	0.995
LSM3	LSM1	U5D0U8	W1NW09	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.996
LSM3	LSM4	U5D0U8	W1P3L4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	U5D029_AMBTC	U5D0U8	U5D029	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.792
LSM3	U5D0I5_AMBTC	U5D0U8	U5D0I5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.798
LSM3	W1NJZ9_AMBTC	U5D0U8	W1NJZ9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nudix hydrolase domain-containing protein.	0.593
LSM3	W1NPV7_AMBTC	U5D0U8	W1NPV7	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.833
LSM3	W1P5G7_AMBTC	U5D0U8	W1P5G7	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.792
LSM3	W1PDG7_AMBTC	U5D0U8	W1PDG7	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.952
LSM3	W1PP03_AMBTC	U5D0U8	W1PP03	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.999
LSM3	W1PQS6_AMBTC	U5D0U8	W1PQS6	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	0.999