STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NKJ5_AMBTCTubulin-specific chaperone A; Belongs to the TBCA family. (112 aa)    
Predicted Functional Partners:
U5CR37_AMBTC
TFCD_C domain-containing protein.
    
 0.661
W1PHI2_AMBTC
Uncharacterized protein.
   
  
 0.660
U5D4X7_AMBTC
CAP-Gly domain-containing protein.
   
 
 0.609
W1NN40_AMBTC
Uncharacterized protein.
   
 
 0.594
W1PFG9_AMBTC
C-CAP/cofactor C-like domain-containing protein.
      
 0.584
W1P5W8_AMBTC
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
   0.551
W1P8J8_AMBTC
T-complex protein 1 subunit delta.
   
 
 0.550
W1NT58_AMBTC
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.540
W1NYD7_AMBTC
CAP-Gly domain-containing protein.
      
 0.537
U5CXT4_AMBTC
Uncharacterized protein.
   
 0.510
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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