STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NKS2_AMBTCUncharacterized protein. (236 aa)    
Predicted Functional Partners:
W1NSU7_AMBTC
DAGKc domain-containing protein.
    
 0.938
W1P0B1_AMBTC
Uncharacterized protein.
    
 0.931
W1P8Z6_AMBTC
DAGKc domain-containing protein.
     
 0.925
W1PXX2_AMBTC
Uncharacterized protein.
     
 0.920
U5D9G1_AMBTC
Uncharacterized protein.
     
 0.915
W1NWJ7_AMBTC
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
 0.915
W1NJ76_AMBTC
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
     
 0.913
W1PI18_AMBTC
Uncharacterized protein.
  
  
 
0.902
W1NEZ7_AMBTC
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
     
  0.900
W1NGV5_AMBTC
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
     
  0.900
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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