STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NNA0_AMBTCPKS_ER domain-containing protein. (302 aa)    
Predicted Functional Partners:
W1PPK0_AMBTC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.726
W1NMN1_AMBTC
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.709
W1NMQ2_AMBTC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.564
W1PM74_AMBTC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.564
U5D0U3_AMBTC
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.553
W1NKX7_AMBTC
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.552
W1NLL7_AMBTC
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.552
W1PLL5_AMBTC
Uncharacterized protein.
      
 0.533
U5D7X9_AMBTC
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.528
U5DB47_AMBTC
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.528
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.