W1NNM9_AMBTC protein (Amborella trichopoda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W1NNM9_AMBTC

Uncharacterized protein. (447 aa)

Predicted Functional Partners:

U5CY83_AMBTC

0.473

U5D4H8_AMBTC

0.456

U5D4I2_AMBTC

0.452

U5D9S6_AMBTC

0.452

W1PJF7_AMBTC

0.428

W1NUT9_AMBTC

0.419

W1NSM9_AMBTC

0.415

U5CQG3_AMBTC

0.410

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
U5CQG3_AMBTC	W1NNM9_AMBTC	U5CQG3	W1NNM9	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	Uncharacterized protein.	0.410
U5CY83_AMBTC	W1NNM9_AMBTC	U5CY83	W1NNM9	Uncharacterized protein.	Uncharacterized protein.	0.473
U5D4H8_AMBTC	W1NNM9_AMBTC	U5D4H8	W1NNM9	Uncharacterized protein.	Uncharacterized protein.	0.456
U5D4I2_AMBTC	W1NNM9_AMBTC	U5D4I2	W1NNM9	Uncharacterized protein.	Uncharacterized protein.	0.452
U5D9S6_AMBTC	W1NNM9_AMBTC	U5D9S6	W1NNM9	Uncharacterized protein.	Uncharacterized protein.	0.452
W1NNM9_AMBTC	U5CQG3_AMBTC	W1NNM9	U5CQG3	Uncharacterized protein.	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	0.410
W1NNM9_AMBTC	U5CY83_AMBTC	W1NNM9	U5CY83	Uncharacterized protein.	Uncharacterized protein.	0.473
W1NNM9_AMBTC	U5D4H8_AMBTC	W1NNM9	U5D4H8	Uncharacterized protein.	Uncharacterized protein.	0.456
W1NNM9_AMBTC	U5D4I2_AMBTC	W1NNM9	U5D4I2	Uncharacterized protein.	Uncharacterized protein.	0.452
W1NNM9_AMBTC	U5D9S6_AMBTC	W1NNM9	U5D9S6	Uncharacterized protein.	Uncharacterized protein.	0.452
W1NNM9_AMBTC	W1NSM9_AMBTC	W1NNM9	W1NSM9	Uncharacterized protein.	TIR domain-containing protein.	0.415
W1NNM9_AMBTC	W1NUT9_AMBTC	W1NNM9	W1NUT9	Uncharacterized protein.	Uncharacterized protein.	0.419
W1NNM9_AMBTC	W1PJF7_AMBTC	W1NNM9	W1PJF7	Uncharacterized protein.	Uncharacterized protein.	0.428
W1NSM9_AMBTC	W1NNM9_AMBTC	W1NSM9	W1NNM9	TIR domain-containing protein.	Uncharacterized protein.	0.415
W1NUT9_AMBTC	W1NNM9_AMBTC	W1NUT9	W1NNM9	Uncharacterized protein.	Uncharacterized protein.	0.419
W1PJF7_AMBTC	W1NNM9_AMBTC	W1PJF7	W1NNM9	Uncharacterized protein.	Uncharacterized protein.	0.428