STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NP02_AMBTCProtein kinase domain-containing protein. (165 aa)    
Predicted Functional Partners:
W1PU05_AMBTC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.887
W1PPV7_AMBTC
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.886
W1PAQ4_AMBTC
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.852
W1PFC3_AMBTC
Uncharacterized protein.
   
 0.837
U5CZN2_AMBTC
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.828
W1NQP3_AMBTC
Uncharacterized protein.
   
 0.812
W1PXA7_AMBTC
Rhodanese domain-containing protein.
   
 0.804
W1PEG3_AMBTC
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.799
U5DDD7_AMBTC
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.795
W1NMG8_AMBTC
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.795
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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