STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NQE5_AMBTCUncharacterized protein. (416 aa)    
Predicted Functional Partners:
W1P894_AMBTC
Uncharacterized protein.
     
  0.900
W1PD68_AMBTC
Uncharacterized protein.
   
  
 0.656
W1NNU8_AMBTC
Pinin_SDK_memA domain-containing protein.
   
    0.645
TIC214
Protein TIC 214; Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein- conducting channel at the inner envelope.
   
   0.515
U5CVV8_AMBTC
Uncharacterized protein.
   
   0.515
W1P098_AMBTC
Protein kinase domain-containing protein.
   
    0.497
W1NQZ1_AMBTC
Uncharacterized protein.
      
 0.412
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (28%) [HD]