STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NRX5_AMBTCUncharacterized protein. (325 aa)    
Predicted Functional Partners:
W1NPK2_AMBTC
AMP-binding domain-containing protein.
 
     0.928
W1PI51_AMBTC
Uncharacterized protein.
   
 0.923
W1PE54_AMBTC
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.919
W1NMQ2_AMBTC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.917
W1PM74_AMBTC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.917
W1PMR6_AMBTC
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.917
W1NUR2_AMBTC
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.909
W1PR82_AMBTC
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.909
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 0.908
W1NJX1_AMBTC
PKS_AT domain-containing protein.
    
 0.908
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.