STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NSH8_AMBTCBTP domain-containing protein. (69 aa)    
Predicted Functional Partners:
W1PE16_AMBTC
Uncharacterized protein.
    
 0.972
W1P187_AMBTC
TAF domain-containing protein.
    
 0.971
U5DIY7_AMBTC
TAFII28 domain-containing protein.
   
 0.970
U5D8X8_AMBTC
Uncharacterized protein.
    
 0.961
W1PA15_AMBTC
Uncharacterized protein.
    
 0.961
W1NE56_AMBTC
Peptidase_M1 domain-containing protein.
    
 0.959
W1PCC3_AMBTC
TAFII55_N domain-containing protein.
    
 0.957
W1NNI6_AMBTC
Uncharacterized protein.
    
 0.956
W1NU21_AMBTC
Uncharacterized protein.
    
 0.955
W1PUB7_AMBTC
Uncharacterized protein.
    
 0.932
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.