STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NWG7_AMBTCUncharacterized protein. (134 aa)    
Predicted Functional Partners:
W1PKK9_AMBTC
Uncharacterized protein.
   
  
 0.552
U5D6T1_AMBTC
Uncharacterized protein.
   
  
 0.539
W1PSX7_AMBTC
Uncharacterized protein.
      
 0.535
U5D513_AMBTC
Uncharacterized protein.
      
 0.461
W1P351_AMBTC
AB hydrolase-1 domain-containing protein.
      
 0.461
U5CWN5_AMBTC
Uncharacterized protein.
      
 0.451
U5CZG2_AMBTC
Uncharacterized protein.
      
 0.451
U5D5V1_AMBTC
GDT1 family protein.
      
 0.451
W1PAZ7_AMBTC
Uncharacterized protein.
      
 0.451
W1PB80_AMBTC
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.451
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.