STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NXA2_AMBTCRanBD1 domain-containing protein. (227 aa)    
Predicted Functional Partners:
W1NM73_AMBTC
WPP domain-containing protein.
   
 0.962
W1NSZ7_AMBTC
Nuclear pore protein.
   
 0.949
W1NK25_AMBTC
Uncharacterized protein.
   
 0.943
W1PRX5_AMBTC
Nup54 domain-containing protein.
   
 0.928
W1NR64_AMBTC
C2H2-type domain-containing protein.
   
 0.926
W1PCY8_AMBTC
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.923
W1NHH6_AMBTC
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.891
W1P9A4_AMBTC
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.891
W1PEZ6_AMBTC
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.891
W1PHV3_AMBTC
Uncharacterized protein.
    
 0.891
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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