STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NXP1_AMBTCUncharacterized protein. (267 aa)    
Predicted Functional Partners:
U5CSE5_AMBTC
Thioredoxin domain-containing protein.
  
 0.718
U5D1X0_AMBTC
Uncharacterized protein.
    
   0.716
W1NGS8_AMBTC
Uncharacterized protein.
    
   0.716
W1P216_AMBTC
Thioredoxin domain-containing protein.
  
 0.590
U5CWC7_AMBTC
PMSR domain-containing protein.
   
 0.502
W1NU48_AMBTC
PMSR domain-containing protein.
   
 0.502
W1PG40_AMBTC
PMSR domain-containing protein.
   
 0.502
U5D584_AMBTC
Thioredoxin domain-containing protein.
  
 
 0.474
W1PFE7_AMBTC
Uncharacterized protein.
   
 0.467
U5D5F9_AMBTC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.455
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.