STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NZD1_AMBTCMI domain-containing protein. (177 aa)    
Predicted Functional Partners:
U5CXZ1_AMBTC
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.947
U5D018_AMBTC
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.921
W1PP24_AMBTC
MIF4G domain-containing protein.
   
 0.865
U5D007_AMBTC
Uncharacterized protein.
   
 0.752
U5DBY3_AMBTC
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
   
 0.752
U5DCY6_AMBTC
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.752
U5D2Y9_AMBTC
Helicase ATP-binding domain-containing protein.
    
 0.742
U5CZE9_AMBTC
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.732
U5DIN0_AMBTC
Uncharacterized protein.
   
 0.732
W1PI19_AMBTC
Uncharacterized protein.
   
 0.732
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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