STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NZY5_AMBTCUncharacterized protein. (312 aa)    
Predicted Functional Partners:
W1PNZ5_AMBTC
Uncharacterized protein.
 
     0.900
W1P8V7_AMBTC
Uncharacterized protein.
 
     0.894
W1P1Q2_AMBTC
Uncharacterized protein.
 
     0.544
W1NJD0_AMBTC
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.532
W1PNN6_AMBTC
Aa_trans domain-containing protein.
  
     0.441
U5DA60_AMBTC
Aa_trans domain-containing protein.
  
     0.411
U5CXV6_AMBTC
MOSC domain-containing protein.
   
 
 0.408
U5D6Y5_AMBTC
Aa_trans domain-containing protein.
  
     0.404
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.