STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1P7Z2_AMBTCCNDH2_N domain-containing protein. (92 aa)    
Predicted Functional Partners:
W1PPA4_AMBTC
Structural maintenance of chromosomes protein.
   
 0.978
W1P3N8_AMBTC
Cnd1 domain-containing protein.
  
 0.969
W1PS82_AMBTC
Uncharacterized protein.
   
 0.958
W1PSS5_AMBTC
Uncharacterized protein.
   
 0.958
W1PTT0_AMBTC
Structural maintenance of chromosomes protein.
   
 0.955
U5D0S3_AMBTC
Uncharacterized protein.
   
 
 0.669
W1NZC1_AMBTC
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 
 0.669
W1PFC3_AMBTC
Uncharacterized protein.
   
 
  0.667
W1NKW2_AMBTC
Cnd3 domain-containing protein.
   
 0.663
W1PYU3_AMBTC
SMC_N domain-containing protein.
   
 0.630
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.