STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1P9M2_AMBTCUncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (200 aa)    
Predicted Functional Partners:
U5DCK1_AMBTC
Ribosomal_L18_c domain-containing protein.
  
 
 0.990
W1NT80_AMBTC
Uncharacterized protein.
  
 
 0.990
W1PTS5_AMBTC
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.990
W1PJG6_AMBTC
Ribosomal_TL5_C domain-containing protein.
   
 
 0.986
W1PKM3_AMBTC
Ribosomal_S10 domain-containing protein.
  
 
 0.975
W1P4K8_AMBTC
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.973
rpl36
50S ribosomal protein L36, chloroplastic.
  
 
 0.971
W1NKZ6_AMBTC
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.971
W1PNY1_AMBTC
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.971
W1PPQ7_AMBTC
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.971
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.