STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PC77_AMBTCFerritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family. (251 aa)    
Predicted Functional Partners:
U5CSE5_AMBTC
Thioredoxin domain-containing protein.
  
  
 0.768
W1P216_AMBTC
Thioredoxin domain-containing protein.
  
  
 0.768
W1P381_AMBTC
Rubredoxin-like domain-containing protein.
  
  
 0.665
W1NSZ2_AMBTC
Thioredoxin reductase.
  
  
 0.631
W1NJN9_AMBTC
GST N-terminal domain-containing protein.
      
 0.600
W1NRA5_AMBTC
Uncharacterized protein.
    
 
 0.600
W1P6M1_AMBTC
Thioredoxin domain-containing protein.
     
 0.580
W1PDW6_AMBTC
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.554
W1P2M5_AMBTC
Uncharacterized protein; Belongs to the arginase family.
  
  
 0.553
W1NRT4_AMBTC
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
      
 0.538
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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