STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PD45_AMBTCPALP domain-containing protein. (501 aa)    
Predicted Functional Partners:
U5D9Q0_AMBTC
IGPS domain-containing protein.
  
 
 0.998
W1P1K6_AMBTC
Uncharacterized protein; Belongs to the TrpA family.
  
 0.998
W1P3C2_AMBTC
Uncharacterized protein; Belongs to the TrpA family.
  
 0.998
W1P9B3_AMBTC
PRAI domain-containing protein.
  
 
 0.981
W1NDX3_AMBTC
Threonine dehydratase.
  
 0.953
W1P3X2_AMBTC
Uncharacterized protein.
  
 
 0.950
W1PGU8_AMBTC
Uncharacterized protein.
  
 
 0.945
W1P5T4_AMBTC
Uncharacterized protein.
  
 
 0.942
W1NML3_AMBTC
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.936
W1PUM4_AMBTC
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.936
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.