STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PE99_AMBTCAmidohydro-rel domain-containing protein. (467 aa)    
Predicted Functional Partners:
U5D8C5_AMBTC
Uncharacterized protein.
    
 0.640
U5DD96_AMBTC
IU_nuc_hydro domain-containing protein.
    
 0.640
W1PJR5_AMBTC
Uncharacterized protein.
    
 0.640
W1PXT6_AMBTC
IU_nuc_hydro domain-containing protein.
    
 0.640
U5D0G3_AMBTC
Phenylalanine ammonia-lyase.
  
 
 0.635
W1PEM3_AMBTC
Phenylalanine ammonia-lyase.
  
 
 0.635
W1PMF7_AMBTC
Phenylalanine ammonia-lyase.
  
 
 0.635
W1PT25_AMBTC
Uncharacterized protein; Belongs to the PAL/histidase family.
  
 
 0.635
W1PTP0_AMBTC
Phenylalanine ammonia-lyase.
  
 
 0.635
W1NTW3_AMBTC
PNP_UDP_1 domain-containing protein.
    
 0.624
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.